改良版EOを用いた蛋白質立体構造アラインメント

URI http://harp.lib.hiroshima-u.ac.jp/hiroshima-cu/metadata/10443
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Title
改良版EOを用いた蛋白質立体構造アラインメント
Title Alternative
Modified Extremal Optimization for Optimal Protein Structure Alignment
Author
氏名 中田 章宏
ヨミ ナカタ アキヒロ
別名 AKIHIRO Nakata
氏名 田村 慶一
ヨミ タムラ ケイイチ
別名 TAMURA Keiichi
氏名 北上 始
ヨミ キタカミ ハジメ
別名 KITAKAMI Hajime
氏名 三村 賢太
ヨミ ミムラ ケンタ
別名 MIMURA Kenta
氏名 高橋 誉文
ヨミ タカハシ シゲフミ
別名 TAKAHASHI Shigehumi
Abstract

Extracting similar three-dimentional structures between proteins is one of the most important challenges for bioinformatics. The protein structure alignment is one of the most effective methods to extract similar three-dimentional structures of two proteins, and CMO(Contact Map Overlap) is formulated as a combinational optimization for the protein structure alignment. In this paper, we propose a novel heuristic for CMO problem using Modified-EO.

Journal Title
2012 IEEE SMC Hiroshima Chapter Young Researchers' Workshop Proceedings = 2012 IEEE SMC Hiroshima Chapter 若手研究会講演論文集
Spage
39
Epage
42
Published Date
2012-07
Publisher
IEEE SMC Hiroshima Chapter
Language
jpn
NIIType
Conference Paper
Text Version
著者版
Rights
©Copyright by IEEE SMC Hiroshima Chapter. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting
republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
Relation URL
Note

2012 IEEE SMC Hiroshima Chapter若手研究会, 2012年7月14日, 広島市立大学

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hiroshima-cu